cosmotool/external/external_build.cmake
Guilhem Lavaux 50bbea55b1 Upgrade HDF5
2015-06-03 14:15:41 +02:00

254 lines
9.6 KiB
CMake

include(FindOpenMP)
OPTION(ENABLE_OPENMP "Set to Yes if Healpix and/or you need openMP" OFF)
SET(FFTW_URL "http://www.fftw.org/fftw-3.3.3.tar.gz" CACHE URL "URL to download FFTW from")
SET(EIGEN_URL "http://bitbucket.org/eigen/eigen/get/3.1.4.tar.gz" CACHE URL "URL to download Eigen from")
SET(GENGETOPT_URL "ftp://ftp.gnu.org/gnu/gengetopt/gengetopt-2.22.5.tar.gz" CACHE STRING "URL to download gengetopt from")
SET(HDF5_URL "http://www.hdfgroup.org/ftp/HDF5/releases/hdf5-1.8.15/src/hdf5-1.8.15.tar.gz" CACHE STRING "URL to download HDF5 from")
SET(NETCDF_URL "http://www.unidata.ucar.edu/downloads/netcdf/ftp/netcdf-4.1.3.tar.gz" CACHE STRING "URL to download NetCDF from")
SET(BOOST_URL "http://sourceforge.net/projects/boost/files/boost/1.49.0/boost_1_49_0.tar.gz/download" CACHE STRING "URL to download Boost from")
SET(GSL_URL "ftp://ftp.gnu.org/gnu/gsl/gsl-1.15.tar.gz" CACHE STRING "URL to download GSL from ")
mark_as_advanced(FFTW_URL EIGEN_URL HDF5_URL NETCDF_URL BOOST_URL GSL_URL)
IF(ENABLE_OPENMP)
IF (NOT OPENMP_FOUND)
MESSAGE(ERROR "No known compiler option for enabling OpenMP")
ENDIF(NOT OPENMP_FOUND)
SET(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} ${OpenMP_C_FLAGS}")
SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${OpenMP_CXX_FLAGS}")
SET(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} ${OpenMP_C_FLAGS}")
ENDIF(ENABLE_OPENMP)
SET(BUILD_PREFIX ${CMAKE_BINARY_DIR}/external_build)
SET(EXT_INSTALL ${CMAKE_BINARY_DIR}/ext_install)
if (ENABLE_SHARP)
SET(SHARP_SOURCE ${CMAKE_SOURCE_DIR}/external/sharp)
SET(DEP_BUILD ${CMAKE_SOURCE_DIR}/external/sharp/auto)
ExternalProject_Add(sharp
SOURCE_DIR ${SHARP_SOURCE}
BUILD_IN_SOURCE 1
CONFIGURE_COMMAND ${SHARP_SOURCE}/configure "CC=${CMAKE_C_COMPILER}" "CXX=${CMAKE_CXX_COMPILER}" --prefix=${DEP_BUILD}
BUILD_COMMAND ${CMAKE_MAKE_PROGRAM}
INSTALL_COMMAND echo "No install"
)
SET(CUTILS_LIBRARY ${DEP_BUILD}/lib/libc_utils.a)
SET(FFTPACK_LIBRARY ${DEP_BUILD}/lib/libfftpack.a)
SET(SHARP_LIBRARY ${DEP_BUILD}/lib/libsharp.a)
SET(SHARP_LIBRARIES ${SHARP_LIBRARY} ${FFTPACK_LIBRARY} ${CUTILS_LIBRARY})
SET(SHARP_INCLUDE_PATH ${DEP_BUILD}/include)
endif (ENABLE_SHARP)
###############
# Build HDF5
###############
if (INTERNAL_HDF5)
SET(HDF5_SOURCE_DIR ${BUILD_PREFIX}/hdf5-prefix/src/hdf5)
SET(HDF5_BIN_DIR ${EXT_INSTALL})
ExternalProject_Add(hdf5
PREFIX ${BUILD_PREFIX}/hdf5-prefix
URL ${HDF5_URL}
CONFIGURE_COMMAND ${HDF5_SOURCE_DIR}/configure
--disable-shared --enable-cxx --with-pic
--prefix=${HDF5_BIN_DIR} --libdir=${HDF5_BIN_DIR}/lib
CPPFLAGS=${CONFIGURE_CPP_FLAGS} CC=${CMAKE_C_COMPILER}
CXX=${CMAKE_CXX_COMPILER}
BUILD_IN_SOURCE 1
INSTALL_COMMAND ${CMAKE_MAKE_PROGRAM} install
)
SET(cosmotool_DEPS ${cosmotool_DEPS} hdf5)
SET(hdf5_built hdf5)
set(HDF5_LIBRARY ${HDF5_BIN_DIR}/lib/libhdf5.a CACHE STRING "HDF5 lib" FORCE)
set(HDF5_CPP_LIBRARY ${HDF5_BIN_DIR}/lib/libhdf5_cpp.a CACHE STRING "HDF5 C++ lib" FORCE)
set(HDF5_HL_LIBRARY ${HDF5_BIN_DIR}/lib/libhdf5_hl.a CACHE STRING "HDF5-HL lib" FORCE)
set(HDF5_HL_CPP_LIBRARY ${HDF5_BIN_DIR}/lib/libhdf5_hl_cpp.a CACHE STRING "HDF5-HL C++ lib" FORCE)
SET(HDF5_INCLUDE_PATH ${HDF5_BIN_DIR}/include CACHE STRING "HDF5 include path" FORCE)
SET(ENV{HDF5_ROOT} ${HDF5_BIN_DIR})
SET(HDF5_ROOTDIR ${HDF5_BIN_DIR})
SET(CONFIGURE_LDFLAGS "${CONFIGURE_LDFLAGS} -L${HDF5_BIN_DIR}/lib")
else(INTERNAL_HDF5)
find_path(HDF5_INCLUDE_PATH hdf5.h)
find_library(HDF5_LIBRARY hdf5)
find_library(HDF5_CPP_LIBRARY hdf5_cpp)
find_library(HDF5_HL_CPP_LIBRARY hdf5_hl_cpp)
find_library(HDF5_HL_LIBRARY hdf5_hl)
endif (INTERNAL_HDF5)
SET(CONFIGURE_CPP_FLAGS "${CONFIGURE_CPP_FLAGS} -I${HDF5_INCLUDE_PATH}")
mark_as_advanced(HDF5_INCLUDE_PATH HDF5_LIBRARY HDF5_CPP_LIBRARY HDF5_HL_LIBRARY HDF5_HL_CPP_LIBRARY)
###############
# Build NetCDF
###############
if (INTERNAL_NETCDF)
SET(NETCDF_SOURCE_DIR ${BUILD_PREFIX}/netcdf-prefix/src/netcdf)
SET(NETCDF_BIN_DIR ${EXT_INSTALL})
SET(CONFIGURE_CPP_FLAGS "${CONFIGURE_CPP_FLAGS} -I${NETCDF_BIN_DIR}/include")
SET(CONFIGURE_LDFLAGS "${CONFIGURE_LDFLAGS} -L${NETCDF_BIN_DIR}/lib")
SET(EXTRA_NC_FLAGS CPPFLAGS=${CONFIGURE_CPP_FLAGS} LDFLAGS=${CONFIGURE_LDFLAGS})
ExternalProject_Add(netcdf
DEPENDS ${hdf5_built}
PREFIX ${BUILD_PREFIX}/netcdf-prefix
URL ${NETCDF_URL}
CONFIGURE_COMMAND ${NETCDF_SOURCE_DIR}/configure
--prefix=${NETCDF_BIN_DIR} --libdir=${NETCDF_BIN_DIR}/lib
--enable-netcdf-4 --with-pic --disable-shared --disable-dap
--disable-cdmremote --disable-rpc --enable-cxx-4
--disable-examples ${EXTRA_NC_FLAGS} CC=${CMAKE_C_COMPILER}
CXX=${CMAKE_CXX_COMPILER}
BUILD_IN_SOURCE 1
INSTALL_COMMAND ${CMAKE_MAKE_PROGRAM} install
)
SET(CONFIGURE_CPP_LDFLAGS "${CONFIGURE_LDFLAGS}")
SET(EXTRA_NC_FLAGS CPPFLAGS=${CONFIGURE_CPP_FLAGS} LDFLAGS=${CONFIGURE_CPP_LDFLAGS})
SET(cosmotool_DEPS ${cosmotool_DEPS} netcdf)
SET(NETCDF_LIBRARY ${NETCDF_BIN_DIR}/lib/libnetcdf.a CACHE STRING "NetCDF lib" FORCE)
SET(NETCDFCPP_LIBRARY ${NETCDF_BIN_DIR}/lib/libnetcdf_c++4.a CACHE STRING "NetCDF-C++ lib" FORCE)
SET(NETCDF_INCLUDE_PATH ${NETCDF_BIN_DIR}/include CACHE STRING "NetCDF include" FORCE)
SET(NETCDFCPP_INCLUDE_PATH ${NETCDF_INCLUDE_PATH} CACHE STRING "NetCDF C++ include path" FORCE)
ELSE(INTERNAL_NETCDF)
find_path(NETCDF_INCLUDE_PATH NAMES netcdf.h)
find_path(NETCDFCPP_INCLUDE_PATH NAMES netcdfcpp.h netcdf)
find_library(NETCDF_LIBRARY netcdf)
find_library(NETCDFCPP_LIBRARY NAMES netcdf_c++ netcdf_c++4)
SET(CONFIGURE_CPP_FLAGS ${CONFIGURE_CPP_FLAGS}
-I${NETCDF_INCLUDE_PATH} -I${NETCDFCPP_INCLUDE_PATH})
endif (INTERNAL_NETCDF)
mark_as_advanced(NETCDF_LIBRARY NETCDFCPP_LIBRARY NETCDF_INCLUDE_PATH NETCDFCPP_INCLUDE_PATH)
##################
# Build BOOST
##################
if (INTERNAL_BOOST)
SET(BOOST_SOURCE_DIR ${BUILD_PREFIX}/boost-prefix/src/boost)
ExternalProject_Add(boost
URL ${BOOST_URL}
PREFIX ${BUILD_PREFIX}/boost-prefix
CONFIGURE_COMMAND
${BOOST_SOURCE_DIR}/bootstrap.sh --prefix=${CMAKE_BINARY_DIR}/ext_build/boost
BUILD_IN_SOURCE 1
BUILD_COMMAND ${BOOST_SOURCE_DIR}/b2 --with-exception
INSTALL_COMMAND echo "No install"
)
set(Boost_INCLUDE_DIRS ${BOOST_SOURCE_DIR} CACHE STRING "Boost path" FORCE)
set(Boost_LIBRARIES ${BOOST_SOURCE_DIR}/stage/lib/libboost_python.a CACHE STRING "Boost libraries" FORCE)
set(Boost_FOUND YES)
ELSE (INTERNAL_BOOST)
find_package(Boost 1.53)
endif (INTERNAL_BOOST)
mark_as_advanced(Boost_INCLUDE_DIRS Boost_LIBRARIES)
##################
# Build GSL
##################
IF(INTERNAL_GSL)
SET(GSL_SOURCE_DIR ${BUILD_PREFIX}/gsl-prefix/src/gsl)
ExternalProject_Add(gsl
URL ${GSL_URL}
PREFIX ${BUILD_PREFIX}/gsl-prefix
CONFIGURE_COMMAND ${GSL_SOURCE_DIR}/configure
--prefix=${EXT_INSTALL} --disable-shared
--with-pic
CPPFLAGS=${CONFIGURE_CPP_FLAGS} CC=${CMAKE_C_COMPILER} CXX=${CMAKE_CXX_COMPILER}
BUILD_IN_SOURCE 1
BUILD_COMMAND ${CMAKE_MAKE_PROGRAM}
INSTALL_COMMAND ${CMAKE_MAKE_PROGRAM} install
)
SET(GSL_INTERNAL_LIBS ${EXT_INSTALL}/lib)
SET(GSL_LIBRARY ${GSL_INTERNAL_LIBS}/libgsl.a CACHE STRING "GSL internal path" FORCE)
SET(GSLCBLAS_LIBRARY ${GSL_INTERNAL_LIBS}/libgslcblas.a CACHE STRING "GSL internal path" FORCE)
set(GSL_INCLUDE_PATH ${CMAKE_BINARY_DIR}/ext_build/gsl/include CACHE STRING "GSL internal path" FORCE)
SET(cosmotool_DEPS ${cosmotool_DEPS} gsl)
ELSE(INTERNAL_GSL)
find_path(GSL_INCLUDE_PATH NAMES gsl/gsl_blas.h)
find_library(GSL_LIBRARY gsl)
find_library(GSLCBLAS_LIBRARY gslcblas)
set(GSL_LIBRARIES ${GSL_LIBRARY} ${GSLCBLAS_LIBRARY})
ENDIF(INTERNAL_GSL)
mark_as_advanced(GSL_LIBRARY GSLCBLAS_LIBRARY GSL_INCLUDE_PATH)
#############
# Build FFTW
#############
IF(INTERNAL_FFTW)
SET(EXTRA_FFTW_CONF)
IF(HAVE_SSE)
SET(EXTRA_FFTW_CONF ${EXTRA_FFTW_CONF} --enable-sse)
ENDIF(HAVE_SSE)
IF(HAVE_SSE2)
SET(EXTRA_FFTW_CONF ${EXTRA_FFTW_CONF} --enable-sse2)
ENDIF(HAVE_SSE2)
IF(HAVE_AVX)
SET(EXTRA_FFTW_CONF ${EXTRA_FFTW_CONF} --enable-avx)
ENDIF(HAVE_AVX)
SET(cosmotool_DEPS ${cosmotool_DEPS} fftw)
SET(FFTW_SOURCE ${BUILD_PREFIX}/fftw-prefix/src/fftw)
ExternalProject_Add(fftw
URL ${FFTW_URL}
PREFIX ${BUILD_PREFIX}/fftw-prefix
CONFIGURE_COMMAND
${FFTW_SOURCE}/configure
--prefix=${EXT_INSTALL}
${EXTRA_FFTW_CONF} --disable-shared --enable-threads
BUILD_COMMAND ${CMAKE_MAKE_PROGRAM}
INSTALL_COMMAND ${CMAKE_MAKE_PROGRAM} install
)
SET(FFTW3_LIBRARY_DIRS ${EXT_INSTALL}/lib)
SET(FFTW3_INCLUDE_PATH ${EXT_INSTALL}/include)
SET(FFTW3_THREADS ${EXT_INSTALL}/lib/libfftw3_threads.a)
SET(FFTW3_LIBRARIES ${EXT_INSTALL}/lib/libfftw3.a)
ELSE (INTERNAL_FFTW)
pkg_check_modules(FFTW3 fftw3>=3.3)
pkg_check_modules(FFTW3F fftw3f>=3.3)
find_library(FFTW3F_LIBRARY_FULL fftw3f PATHS ${FFTW3F_LIBDIR} NO_DEFAULT_PATH)
find_library(FFTW3_LIBRARY_FULL fftw3 PATHS ${FFTW3_LIBDIR} NO_DEFAULT_PATH)
ENDIF(INTERNAL_FFTW)
##############
# Build Eigen
##############
IF (INTERNAL_EIGEN)
ExternalProject_Add(eigen
URL ${EIGEN_URL}
PREFIX ${BUILD_PREFIX}/eigen-prefix
CMAKE_ARGS -DCMAKE_INSTALL_PREFIX=${EXT_INSTALL}
)
SET(EIGEN_INCLUDE_PATH ${EXT_INSTALL}/include/eigen3)
ELSE (INTERNAL_EIGEN)
pkg_check_modules(EIGEN3 eigen3)
ENDIF(INTERNAL_EIGEN)
SET(OMPTL_BUILD_DIR ${CMAKE_BINARY_DIR}/omptl-prefix/src/omptl)
ExternalProject_Add(omptl
URL ${CMAKE_SOURCE_DIR}/external/omptl-20120422.tar.bz2
CONFIGURE_COMMAND echo "No configure"
BUILD_COMMAND echo "No build"
INSTALL_COMMAND ${CMAKE_COMMAND} -E copy_directory ${OMPTL_BUILD_DIR} ${CMAKE_BINARY_DIR}/external/stage/include/omptl
)
include_directories(${OMPTL_BUILD_DIR}/..)