/*+ This is CosmoTool (./src/fortran.cpp) -- Copyright (C) Guilhem Lavaux (2007-2014) guilhem.lavaux@gmail.com This software is a computer program whose purpose is to provide a toolbox for cosmological data analysis (e.g. filters, generalized Fourier transforms, power spectra, ...) This software is governed by the CeCILL license under French law and abiding by the rules of distribution of free software. You can use, modify and/ or redistribute the software under the terms of the CeCILL license as circulated by CEA, CNRS and INRIA at the following URL "http://www.cecill.info". As a counterpart to the access to the source code and rights to copy, modify and redistribute granted by the license, users are provided only with a limited warranty and the software's author, the holder of the economic rights, and the successive licensors have only limited liability. In this respect, the user's attention is drawn to the risks associated with loading, using, modifying and/or developing or reproducing the software by the user in light of its specific status of free software, that may mean that it is complicated to manipulate, and that also therefore means that it is reserved for developers and experienced professionals having in-depth computer knowledge. Users are therefore encouraged to load and test the software's suitability as regards their requirements in conditions enabling the security of their systems and/or data to be ensured and, more generally, to use and operate it in the same conditions as regards security. The fact that you are presently reading this means that you have had knowledge of the CeCILL license and that you accept its terms. +*/ #include "config.hpp" #include #include #include #include "fortran.hpp" using namespace std; using namespace CosmoTool; UnformattedRead::UnformattedRead(const string& fname) { f = new ifstream(fname.c_str()); if (!*f) throw NoSuchFileException(); swapOrdering = false; cSize = Check_32bits; checkPointRef = checkPointAccum = 0; recordBuffer = 0; } UnformattedRead::UnformattedRead(const char *fname) { f = new ifstream(fname); if (!*f) throw NoSuchFileException(); swapOrdering = false; cSize = Check_32bits; checkPointRef = checkPointAccum = 0; recordBuffer = 0; } UnformattedRead::~UnformattedRead() { if (recordBuffer != 0) delete[] recordBuffer; delete f; } int64_t UnformattedRead::position() const { return f->tellg(); } void UnformattedRead::seek(int64_t pos) { f->clear(); f->seekg(pos, istream::beg); checkPointRef = checkPointAccum = 0; } // Todo implement primitive description void UnformattedRead::setOrdering(Ordering o) { if (o == LittleEndian) { } } void UnformattedRead::setCheckpointSize(CheckpointSize cs) { cSize = cs; } void UnformattedRead::skip(int64_t off) { if (checkPointAccum == 0 && checkPointRef == 0) { // We are not in a checked block f->seekg(off, ios::cur); return; } if (off < 0) throw InvalidUnformattedAccess(); if ((checkPointAccum+off) > checkPointRef) throw InvalidUnformattedAccess(); f->seekg(off, ios::cur); checkPointAccum += off; } void UnformattedRead::beginCheckpoint(bool bufferRecord) { if (checkPointAccum != 0) throw InvalidUnformattedAccess(); checkPointRef = (cSize == Check_32bits) ? 4 : 8; checkPointAccum = 0; checkPointRef = (cSize == Check_32bits) ? readUint32() : readInt64(); checkPointAccum = 0; if (f->eof()) throw EndOfFileException(); if (bufferRecord) { std::cout << "Use fast I/O mode" << std::endl; recordBuffer = new uint8_t[checkPointRef]; f->read(reinterpret_cast(recordBuffer), checkPointRef); } } void UnformattedRead::endCheckpoint(bool autodrop) { if (recordBuffer != 0) { delete[] recordBuffer; recordBuffer = 0; } if (cSize == Check_32bits) { if (checkPointAccum >= 1<<32UL) { always_fail = true; checkPointAccum %= (1<<32UL); } } if (checkPointRef != checkPointAccum) { if (always_fail || !autodrop || checkPointAccum > checkPointRef) { throw InvalidUnformattedAccess(); } f->seekg(checkPointRef-checkPointAccum, ios::cur); } int64_t oldCheckPoint = checkPointRef; checkPointRef = (cSize == Check_32bits) ? 4 : 8; checkPointAccum = 0; checkPointRef = (cSize == Check_32bits) ? readUint32() : readInt64(); if (oldCheckPoint != checkPointRef) { throw InvalidUnformattedAccess(); } checkPointAccum = checkPointRef = 0; } void UnformattedRead::readOrderedBuffer(void *buffer, int size) { if ((checkPointAccum+(uint64_t)size) > checkPointRef) throw InvalidUnformattedAccess(); if (recordBuffer != 0) { memcpy(buffer, &recordBuffer[checkPointAccum], size); } else { f->read((char *)buffer, size); } if (swapOrdering) { char *cb = (char *)buffer; for (int i = 0; i < size/2; i++) swap(cb[i], cb[size-i-1]); } checkPointAccum += size; } double UnformattedRead::readReal64() { union { char b[8]; double d; } a; readOrderedBuffer(&a, 8); return a.d; } float UnformattedRead::readReal32() { union { char b[4]; float f; } a; readOrderedBuffer(&a, 4); return a.f; } uint32_t UnformattedRead::readUint32() { union { char b[4]; uint32_t i; } a; readOrderedBuffer(&a, 4); return a.i; } int32_t UnformattedRead::readInt32() { union { char b[4]; int32_t i; } a; readOrderedBuffer(&a, 4); return a.i; } int64_t UnformattedRead::readInt64() { union { char b[8]; int64_t i; } a; readOrderedBuffer(&a, 8); return a.i; } //// UnformattedWrite UnformattedWrite::UnformattedWrite(const string& fname) { f = new ofstream(fname.c_str()); if (!*f) throw NoSuchFileException(); swapOrdering = false; cSize = Check_32bits; checkPointRef = checkPointAccum = 0; } UnformattedWrite::UnformattedWrite(const char *fname) { f = new ofstream(fname); if (!*f) throw NoSuchFileException(); swapOrdering = false; cSize = Check_32bits; checkPointRef = checkPointAccum = 0; } UnformattedWrite::~UnformattedWrite() { delete f; } // Todo implement primitive description void UnformattedWrite::setOrdering(Ordering o) { if (o == LittleEndian) { } } void UnformattedWrite::setCheckpointSize(CheckpointSize cs) { cSize = cs; } void UnformattedWrite::beginCheckpoint() { if (checkPointAccum != 0) throw InvalidUnformattedAccess(); checkPointRef = f->tellp(); if (cSize == Check_32bits) writeInt32(0); else writeInt64(0); checkPointAccum = 0; if (!*f) throw FilesystemFullException(); } void UnformattedWrite::endCheckpoint() { if (checkPointAccum == 0) throw InvalidUnformattedAccess(); streampos curPos = f->tellp(); int64_t deltaPos = curPos-checkPointRef; deltaPos -= (cSize == Check_32bits) ? 4 : 8; // This is a sanity check. if (checkPointAccum != deltaPos) throw InvalidUnformattedAccess(); uint64_t saveAccum = checkPointAccum; f->seekp(checkPointRef); if (cSize == Check_32bits) writeInt32(saveAccum); else writeInt64(saveAccum); f->seekp(curPos); if (cSize == Check_32bits) writeInt32(saveAccum); else writeInt64(saveAccum); checkPointAccum = checkPointRef = 0; } void UnformattedWrite::writeOrderedBuffer(void *buffer, int size) { f->write((char *)buffer, size); if (swapOrdering) { char *cb = (char *)buffer; for (int i = 0; i < size/2; i++) swap(cb[i], cb[size-i-1]); } checkPointAccum += size; if (!*f) throw FilesystemFullException(); } void UnformattedWrite::writeReal64(double d) { union { char b[8]; double d; } a; a.d = d; writeOrderedBuffer(&a, 8); } void UnformattedWrite::writeReal32(float f) { union { char b[4]; float f; } a; a.f = f; writeOrderedBuffer(&a, 4); } void UnformattedWrite::writeInt32(int32_t i) { union { char b[4]; int32_t i; } a; a.i = i; writeOrderedBuffer(&a, 4); } void UnformattedWrite::writeInt64(int64_t i) { union { char b[8]; int64_t i; } a; a.i = i; writeOrderedBuffer(&a, 8); } void UnformattedWrite::writeInt8(int8_t i) { union { char b; int8_t i; } a; a.i = i; writeOrderedBuffer(&a, 1); }