JaxPM/notebooks/visualize.py
2024-10-27 03:49:07 +01:00

75 lines
2.7 KiB
Python

import jax.numpy as jnp
import matplotlib.pyplot as plt
import numpy as np
def plot_fields(fields_dict, sum_over=None):
"""
Plots sum projections of 3D fields along different axes,
slicing only the first `sum_over` elements along each axis.
Args:
- fields: list of 3D arrays representing fields to plot
- names: list of names for each field, used in titles
- sum_over: number of slices to sum along each axis (default: fields[0].shape[0] // 8)
"""
sum_over = sum_over or list(fields_dict.values())[0].shape[0] // 8
nb_rows = len(fields_dict)
nb_cols = 3
fig, axes = plt.subplots(nb_rows, nb_cols, figsize=(15, 5 * nb_rows))
def plot_subplots(proj_axis, field, row, title):
slicing = [slice(None)] * field.ndim
slicing[proj_axis] = slice(None, sum_over)
slicing = tuple(slicing)
# Sum projection over the specified axis and plot
axes[row, proj_axis].imshow(
field[slicing].sum(axis=proj_axis) + 1,
cmap='magma',
extent=[0, field.shape[proj_axis], 0, field.shape[proj_axis]])
axes[row, proj_axis].set_xlabel('Mpc/h')
axes[row, proj_axis].set_ylabel('Mpc/h')
axes[row, proj_axis].set_title(title)
# Plot each field across the three axes
for i, (name, field) in enumerate(fields_dict.items()):
for proj_axis in range(3):
plot_subplots(proj_axis, field, i,
f"{name} projection {proj_axis}")
plt.tight_layout()
plt.show()
def plot_fields_single_projection(fields_dict, sum_over=None):
"""
Plots a single projection (along axis 0) of 3D fields in one row,
summing over the first `sum_over` elements along the 0-axis.
Args:
- fields_dict: dictionary where keys are field names and values are 3D arrays
- sum_over: number of slices to sum along the projection axis (default: fields[0].shape[0] // 8)
"""
sum_over = sum_over or list(fields_dict.values())[0].shape[0] // 8
nb_cols = len(fields_dict)
fig, axes = plt.subplots(1, nb_cols, figsize=(5 * nb_cols, 5))
for i, (name, field) in enumerate(fields_dict.items()):
# Define the slice for the 0-axis projection
slicing = [slice(None)] * field.ndim
slicing[0] = slice(None, sum_over)
slicing = tuple(slicing)
# Sum projection over axis 0 and plot
axes[i].imshow(
field[slicing].sum(axis=0) + 1,
cmap='magma',
extent=[0, field.shape[1], 0, field.shape[2]]
)
axes[i].set_xlabel('Mpc/h')
axes[i].set_ylabel('Mpc/h')
axes[i].set_title(f"{name} projection 0")
plt.tight_layout()
plt.show()