Add figures with tensorboard

map2map/data/figures.py

@@ -0,0 +1,57 @@
+from math import log2, log10, ceil
+import torch
+import numpy as np
+import matplotlib
+matplotlib.use('Agg')
+import matplotlib.pyplot as plt
+from matplotlib.colors import Normalize, LogNorm, SymLogNorm
+from matplotlib.cm import ScalarMappable
+
+
+def fig3d(*fields, size=64, cmap=None, norm=None):
+    fields = [f.detach().cpu().numpy() if isinstance(f, torch.Tensor) else f
+            for f in fields]
+
+    assert all(isinstance(f, np.ndarray) for f in fields)
+
+    nc = fields[-1].shape[0]
+    nf = len(fields)
+
+    fig, axes = plt.subplots(nc, nf, squeeze=False, figsize=(5 * nf, 4.25 * nc))
+
+    if cmap is None:
+        if (fields[-1] >= 0).all():
+            cmap = 'viridis'
+        elif (fields[-1] <= 0).all():
+            raise NotImplementedError
+        else:
+            cmap = 'RdBu_r'
+
+    if norm is None:
+        def quantize(x):
+            return 2 ** round(log2(x), ndigits=1)
+
+        l2, l1, h1, h2 = np.percentile(fields[-1], [2.5, 16, 84, 97.5])
+        w1, w2 = (h1 - l1) / 2, (h2 - l2) / 2
+
+        if (fields[-1] >= 0).all():
+            if h1 > 0.1 * h2:
+                norm = Normalize(vmin=0, vmax=quantize(2 * h2))
+            else:
+                norm = LogNorm(vmin=quantize(0.5 * l2), vmax=quantize(2 * h2))
+        elif (fields[-1] <= 0).all():
+            raise NotImplementedError
+        else:
+            if w1 > 0.1 * w2:
+                vlim = quantize(2.5 * w1)
+                norm = Normalize(vmin=-vlim, vmax=vlim)
+            else:
+                vlim = quantize(w2)
+                norm = SymLogNorm(linthresh=0.1 * w1, vmin=-vlim, vmax=vlim)
+
+    for c in range(nc):
+        for f in range(nf):
+            axes[c, f].imshow(fields[f][c, 0, :size, :size], cmap=cmap, norm=norm)
+    plt.colorbar(ScalarMappable(norm=norm, cmap=cmap), ax=axes)
+
+    return fig

map2map/train.py

@@ -10,6 +10,7 @@ from torch.utils.data import DataLoader
 from torch.utils.tensorboard import SummaryWriter
 
 from .data import FieldDataset
+from .data.figures import fig3d
 from . import models
 from .models import narrow_like
 from .models.adversary import adv_model_wrapper, adv_criterion_wrapper
@@ -322,6 +323,11 @@ def train(epoch, loader, model, criterion, optimizer, scheduler,
                     'real': epoch_loss[4],
                 }, global_step=epoch+1)
 
+        skip_chan = sum(in_chan) if args.adv and args.cgan else 0
+        args.logger.add_figure('fig/epoch/train',
+                fig3d(output[-1, skip_chan:], target[-1, skip_chan:]),
+                global_step =epoch+1)
+
     return epoch_loss
 
 
@@ -383,4 +389,9 @@ def validate(epoch, loader, model, criterion, adv_model, adv_criterion, args):
                     'real': epoch_loss[4],
                 }, global_step=epoch+1)
 
+        skip_chan = sum(in_chan) if args.adv and args.cgan else 0
+        args.logger.add_figure('fig/epoch/val',
+                fig3d(output[-1, skip_chan:], target[-1, skip_chan:]),
+                global_step =epoch+1)
+
     return epoch_loss