mirror of
https://github.com/Richard-Sti/csiborgtools.git
synced 2024-12-22 18:18:03 +00:00
7f58b1f78c
* change to log10 initlogRs * add uncertainty * add check if hessian negative * update TODO * update TODO * output the error too * save e_logRs * add concentration calculation * calcul concentration * missed comma in a list * Update TODO * fix bug * add box units and pretty status * make uncertainty optional * add BIC function * remove BIC again * add new overdensity calculation * change defualt values to max dist and mass * change to r200 * new halo find * speed up the calculation * add commented fucn * update TODO * add check whether too close to outside boundary * Update TODO * extract velocity as well * calculate m200 and m500 * update nb * update TODO
51 lines
2.1 KiB
Python
51 lines
2.1 KiB
Python
# Copyright (C) 2022 Richard Stiskalek
|
|
# This program is free software; you can redistribute it and/or modify it
|
|
# under the terms of the GNU General Public License as published by the
|
|
# Free Software Foundation; either version 3 of the License, or (at your
|
|
# option) any later version.
|
|
#
|
|
# This program is distributed in the hope that it will be useful, but
|
|
# WITHOUT ANY WARRANTY; without even the implied warranty of
|
|
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
|
|
# Public License for more details.
|
|
#
|
|
# You should have received a copy of the GNU General Public License along
|
|
# with this program; if not, write to the Free Software Foundation, Inc.,
|
|
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
|
|
"""
|
|
Script to split particles into smaller files according to their clump
|
|
membership for faster manipulation. Running this will require a lot of memory.
|
|
"""
|
|
|
|
from tqdm import tqdm
|
|
from os.path import join
|
|
try:
|
|
import csiborgtools
|
|
except ModuleNotFoundError:
|
|
import sys
|
|
sys.path.append("../")
|
|
import csiborgtools
|
|
import utils
|
|
|
|
Nsims = [9844]
|
|
Nsnap = 1016
|
|
partcols = ["x", "y", "z", "vx", "vy", "vz", "M", "level"]
|
|
dumpdir = join(utils.dumpdir, "temp")
|
|
|
|
for Nsim in tqdm(Nsims):
|
|
simpath = csiborgtools.io.get_sim_path(Nsim)
|
|
# Load the clumps, particles' clump IDs and particles.
|
|
clumps = csiborgtools.io.read_clumps(Nsnap, simpath)
|
|
particle_clumps = csiborgtools.io.read_clumpid(Nsnap, simpath,
|
|
verbose=False)
|
|
particles = csiborgtools.io.read_particle(partcols, Nsnap, simpath,
|
|
verbose=False)
|
|
# Drop all particles whose clump index is 0 (not assigned to any halo)
|
|
particle_clumps, particles = csiborgtools.io.drop_zero_indx(
|
|
particle_clumps, particles)
|
|
# Dump it!
|
|
csiborgtools.fits.dump_split_particles(particles, particle_clumps, clumps,
|
|
utils.Nsplits, dumpdir, Nsim, Nsnap,
|
|
verbose=False)
|
|
|
|
print("All finished!")
|