csiborgtools/scripts/field_bulk.sh
Richard Stiskalek ce55a2b47e
Add marginalization over boxes (#131)
* Parallelize over simulations

* Update docs

* Update dependency

* Update imports

* Add adtitional dependencies

* Update .gitignore

* Update ERADME

* Simplify numpyro GOF

* Speed up GOF

* Deepcopy samples

* Update scripts

* Add GPU acceleration

* Select boxes

* Update script

* Optionally sample beta

* Fix old code

* Simplify code

* Start saving log posterior

* Start popping log_likeliood

* Add imports

* Add converting samples

* Fix sctipt name

* Add evidence with harmonic

* Remove comment

* Update imports

* Update imports so that pylians not required

* Stop requiring Pylians to be installed

* Update submission scripts for loops

* Update nb

* Update nb

* Add Manticore boxes

* Add verbosity flag

* Add bulk flow

* Update script

* Update nb

* Update normalization

* Update submit

* Update nb
2024-06-26 10:43:26 +01:00

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Executable file

nthreads=1
memory=12
on_login=1
queue="berg"
env="/mnt/zfsusers/rstiskalek/csiborgtools/venv_csiborg/bin/python"
file="field_bulk.py"
simname=${1}
pythoncm="$env $file --simname $simname"
if [ $on_login -eq 1 ]; then
echo $pythoncm
$pythoncm
else
cm="addqueue -q $queue -n $nthreads -m $memory $pythoncm"
echo "Submitting:"
echo $cm
echo
eval $cm
fi