mirror of
https://github.com/Richard-Sti/csiborgtools.git
synced 2024-12-22 23:18:01 +00:00
fdb0df8d4c
* Move paths to a separate file * Add mmain reader * Add a verbosity flag * Fix imports * Fix bug * Rename files * Return ultimate parents * Add script to generate mmain * Remove mmain path * edit path * Add mmain path * Change function name * Rename function * Turn off verbose * Fix list requirement * Edit init match paths * Fix init pathing * Edit paths docs * Edit dumpdir name * Rename path * Fix split paths * Remove unused import * Add comment * Update readme * remove read mmain * Rename haloatalogue * Fix minor bugs * Update nbs * Add create directory option * Move split jobs * Move spliot jobs * Remove splitting * Add import * Edit script * Deeper split folder * Fix paths bug * Rename catalogue * Rename Catalogue * Add new clumpread * Edit paths * add knn paths * Update commenting * Update imports * Add more conversions * Update temp file * Add a note * Add catalogue * Cooment * Update TODO * Update script * add nb * Update * pep8 * edit paths & pep8 * Fix knn auto paths * add paths docs * Add auto and cross knn paths * Add new paths * Simplify tpcf reading * pep8 patch * update readme * Update progress * pep8 * pep8 * pep8 * pep8 * pep8 * pep8 * pep8 * pep8 * pep8 * pep8 * pep8 * pep8 * pep8 * pep8 * pep8 * Pep 8 and restructure * add lambda spin * add clump and halo * add checks * Edit halo profile fit * Update gitignore * backup script
64 lines
No EOL
2.2 KiB
Python
64 lines
No EOL
2.2 KiB
Python
# Copyright (C) 2022 Richard Stiskalek
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# This program is free software; you can redistribute it and/or modify it
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# under the terms of the GNU General Public License as published by the
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# Free Software Foundation; either version 3 of the License, or (at your
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# option) any later version.
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#
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# This program is distributed in the hope that it will be useful, but
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# WITHOUT ANY WARRANTY; without even the implied warranty of
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# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
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# Public License for more details.
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#
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# You should have received a copy of the GNU General Public License along
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# with this program; if not, write to the Free Software Foundation, Inc.,
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# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
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"""
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Script to generate the mmain files, i.e. sums up the substructe of children.
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"""
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from datetime import datetime
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import numpy
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from mpi4py import MPI
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from TaskmasterMPI import master_process, worker_process
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try:
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import csiborgtools
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except ModuleNotFoundError:
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import sys
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sys.path.append("../")
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import csiborgtools
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# Get MPI things
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comm = MPI.COMM_WORLD
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rank = comm.Get_rank()
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nproc = comm.Get_size()
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paths = csiborgtools.read.CSiBORGPaths(**csiborgtools.paths_glamdring)
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mmain_reader = csiborgtools.read.MmainReader(paths)
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def do_mmain(nsim):
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nsnap = max(paths.get_snapshots(nsim))
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# NOTE: currently works for highest snapshot anyway
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mmain, ultimate_parent = mmain_reader.make_mmain(nsim, verbose=False)
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numpy.savez(paths.mmain_path(nsnap, nsim),
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mmain=mmain, ultimate_parent=ultimate_parent)
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###############################################################################
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# MPI task delegation #
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###############################################################################
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if nproc > 1:
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if rank == 0:
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tasks = list(paths.get_ics(tonew=False))
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master_process(tasks, comm, verbose=True)
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else:
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worker_process(do_mmain, comm, verbose=False)
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else:
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tasks = paths.get_ics(tonew=False)
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for task in tasks:
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print("{}: completing task `{}`.".format(datetime.now(), task))
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do_mmain(task)
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comm.Barrier() |