mirror of
https://github.com/Richard-Sti/csiborgtools.git
synced 2024-10-18 20:25:07 +02:00
2185846e90
* Updat ebounds * fix mistake * add plot script * fix which sims * Add Poisson * Just docs * Hide things to __main__ * Rename paths * Move old script * Remove radpos * Paths renaming * Paths renaming * Remove trunk stuff * Add import * Add nearest neighbour search * Add Quijote fiducial indices * Add final snapshot matching * Add fiducial observer selection * add boxsizes * Add reading functions * Little stuff * Bring back the fiducial observer * Add arguments * Add quijote paths * Add notes * Get this running * Add yaml * Remove Poisson stuff * Get the 2PCF script running * Add not finished htings * Remove comment * Verbosity only on 0th rank! * Update plotting style * Add nearest neighbour CDF * Save radial distance too * Add centres * Add basic plotting
79 lines
2.9 KiB
Python
79 lines
2.9 KiB
Python
# Copyright (C) 2022 Richard Stiskalek
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# This program is free software; you can redistribute it and/or modify it
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# under the terms of the GNU General Public License as published by the
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# Free Software Foundation; either version 3 of the License, or (at your
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# option) any later version.
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#
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# This program is distributed in the hope that it will be useful, but
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# WITHOUT ANY WARRANTY; without even the implied warranty of
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# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
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# Public License for more details.
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#
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# You should have received a copy of the GNU General Public License along
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# with this program; if not, write to the Free Software Foundation, Inc.,
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# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
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"""
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MPI script to calculate density field-derived fields in the CSiBORG
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simulations' final snapshot.
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"""
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from argparse import ArgumentParser
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from datetime import datetime
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from distutils.util import strtobool
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import numpy
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from mpi4py import MPI
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try:
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import csiborgtools
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except ModuleNotFoundError:
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import sys
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sys.path.append("../")
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import csiborgtools
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comm = MPI.COMM_WORLD
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rank = comm.Get_rank()
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nproc = comm.Get_size()
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verbose = nproc == 1
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parser = ArgumentParser()
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parser.add_argument("--ics", type=int, nargs="+", default=None,
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help="IC realisations. If `-1` processes all simulations.")
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parser.add_argument("--kind", type=str, choices=["potential", "velocity"],
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help="What derived field to calculate?")
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parser.add_argument("--MAS", type=str, choices=["NGP", "CIC", "TSC", "PCS"])
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parser.add_argument("--grid", type=int, help="Grid resolution.")
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parser.add_argument("--in_rsp", type=lambda x: bool(strtobool(x)),
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help="Calculate from the RSP density field?")
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args = parser.parse_args()
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paths = csiborgtools.read.Paths(**csiborgtools.paths_glamdring)
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if args.ics is None or args.ics[0] == -1:
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ics = paths.get_ics("csiborg")
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else:
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ics = args.ics
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for i in csiborgtools.fits.split_jobs(len(ics), nproc)[rank]:
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nsim = ics[i]
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if verbose:
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print(f"{datetime.now()}: rank {rank} working on simulation {nsim}.",
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flush=True)
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nsnap = max(paths.get_snapshots(nsim))
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box = csiborgtools.read.CSiBORGBox(nsnap, nsim, paths)
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density_gen = csiborgtools.field.DensityField(box, args.MAS)
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rho = numpy.load(paths.field("density", args.MAS, args.grid, nsim,
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args.in_rsp))
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rho = density_gen.overdensity_field(rho)
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if args.kind == "potential":
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gen = csiborgtools.field.PotentialField(box, args.MAS)
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else:
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raise RuntimeError(f"Field {args.kind} is not implemented yet.")
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field = gen(rho)
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fout = paths.field("potential", args.MAS, args.grid, nsim,
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args.in_rsp)
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print(f"{datetime.now()}: rank {rank} saving output to `{fout}`.")
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numpy.save(fout, field)
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