csiborgtools/scripts/flow_validation.sh
Richard Stiskalek ce55a2b47e
Add marginalization over boxes (#131)
* Parallelize over simulations

* Update docs

* Update dependency

* Update imports

* Add adtitional dependencies

* Update .gitignore

* Update ERADME

* Simplify numpyro GOF

* Speed up GOF

* Deepcopy samples

* Update scripts

* Add GPU acceleration

* Select boxes

* Update script

* Optionally sample beta

* Fix old code

* Simplify code

* Start saving log posterior

* Start popping log_likeliood

* Add imports

* Add converting samples

* Fix sctipt name

* Add evidence with harmonic

* Remove comment

* Update imports

* Update imports so that pylians not required

* Stop requiring Pylians to be installed

* Update submission scripts for loops

* Update nb

* Update nb

* Add Manticore boxes

* Add verbosity flag

* Add bulk flow

* Update script

* Update nb

* Update normalization

* Update submit

* Update nb
2024-06-26 10:43:26 +01:00

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#!/bin/bash
memory=8
on_login=${1}
ndevice=1
device="gpu"
queue="gpulong"
gputype="rtx2080with12gb"
env="/mnt/users/rstiskalek/csiborgtools/venv_gpu_csiborgtools/bin/python"
file="flow_validation.py"
ksmooth=0
if [ "$on_login" != "1" ] && [ "$on_login" != "0" ]; then
echo "Invalid input: 'on_login' (1). Please provide 1 or 0."
exit 1
fi
# Submit a job for each combination of simname, catalogue, ksim
for simname in "csiborg2_main"; do
for catalogue in "2MTF"; do
# for ksim in 0 1 2; do
for ksim in 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 "none"; do
# for ksim in 0; do
pythoncm="$env $file --catalogue $catalogue --simname $simname --ksim $ksim --ksmooth $ksmooth --ndevice $ndevice --device $device"
if [ $on_login -eq 1 ]; then
echo $pythoncm
$pythoncm
else
cm="addqueue -q $queue -s -m $memory --gpus 1 --gputype $gputype $pythoncm"
echo "Submitting:"
echo $cm
eval $cm
fi
echo
sleep 0.05
done
done
done