csiborgtools/scripts_plots/borg_acl.ipynb
Richard Stiskalek 9e4b34f579
Overlap fixing and more (#107)
* Update README

* Update density field reader

* Update name of SDSSxALFAFA

* Fix quick bug

* Add little fixes

* Update README

* Put back fit_init

* Add paths to initial snapshots

* Add export

* Remove some choices

* Edit README

* Add Jens' comments

* Organize imports

* Rename snapshot

* Add additional print statement

* Add paths to initial snapshots

* Add masses to the initial files

* Add normalization

* Edit README

* Update README

* Fix bug in CSiBORG1 so that does not read fof_00001

* Edit README

* Edit README

* Overwrite comments

* Add paths to init lag

* Fix Quijote path

* Add lagpatch

* Edit submits

* Update README

* Fix numpy int problem

* Update README

* Add a flag to keep the snapshots open when fitting

* Add a flag to keep snapshots open

* Comment out some path issue

* Keep snapshots open

* Access directly snasphot

* Add lagpatch for CSiBORG2

* Add treatment of x-z coordinates flipping

* Add radial velocity field loader

* Update README

* Add lagpatch to Quijote

* Fix typo

* Add setter

* Fix typo

* Update README

* Add output halo cat as ASCII

* Add import

* Add halo plot

* Update README

* Add evaluating field at radial distanfe

* Add field shell evaluation

* Add enclosed mass computation

* Add BORG2 import

* Add BORG boxsize

* Add BORG paths

* Edit run

* Add BORG2 overdensity field

* Add bulk flow clauclation

* Update README

* Add new plots

* Add nbs

* Edit paper

* Update plotting

* Fix overlap paths to contain simname

* Add normalization of positions

* Add default paths to CSiBORG1

* Add overlap path simname

* Fix little things

* Add CSiBORG2 catalogue

* Update README

* Add import

* Add TNG density field constructor

* Add TNG density

* Add draft of calculating BORG ACL

* Fix bug

* Add ACL of enclosed density

* Add nmean acl

* Add galaxy bias calculation

* Add BORG acl notebook

* Add enclosed mass calculation

* Add TNG300-1 dir

* Add TNG300 and BORG1 dir

* Update nb
2024-01-30 16:14:07 +00:00

50 KiB

In [1]:
import numpy as np
%matplotlib notebook
import matplotlib.pyplot as plt
# Local imports
try:
    import csiborgtools
except ModuleNotFoundError:
    import sys
    sys.path.append("../")
    import csiborgtools
import utils

%load_ext autoreload
%autoreload 2
In [2]:
obs = utils.load_2mpp()


cols = ["ra", "dec", "mass_cl", "dist"]
mmains = utils.load_mmains(1)
mmains = csiborgtools.utils.list_to_ndarray(mmains, cols)
sim = mmains[0, ...]
sim = csiborgtools.utils.array_to_structured(sim ,cols)
planck = utils.load_planck2015()
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In [3]:
dx = 20
dmin = 125
dmax = dmin + dx

mask_obs = (dmin < obs["CDIST_CMB"]) & (obs["CDIST_CMB"] < dmax)
mask_sim = (dmin < sim["dist"]) & (sim["dist"] < dmax) & (sim["mass_cl"] > 1e12)

width = 6.4
plt.figure(figsize=(width, width*0.75))
plt.scatter(obs["RA"][mask_obs], obs["DEC"][mask_obs], s=1.5, label="2M++")
plt.scatter(sim["ra"][mask_sim] , sim["dec"][mask_sim], s=1.5, label="CSiBORG")
plt.scatter(planck["RA"], planck["DEC"], label="Planck SZ clusters < 214 MPc", c="red")


plt.legend()
plt.xlabel("RA")
plt.ylabel("dec")
plt.tight_layout()
# plt.savefig("../plots/2mpp_overlap.png", dpi=450)
plt.show()
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In [ ]: