mirror of
https://github.com/Richard-Sti/csiborgtools.git
synced 2024-12-22 17:08:03 +00:00
e972f8e3f2
* Simplify box units * Move old scripts * Add printing * Update readers * Disable boundscheck * Add new ordering * Clean up imports * Enforce dtype and add mass to quijote * Simplify print statements * Fix little typos * Fix key bug * Bug fixing * Delete boring comments * Improve ultimate clumps for PHEW * Delete boring comments * Add basic reading * Remove 0th index HID * Add flipping of X and Z * Updates to halo catalogues * Add ordered caching * Fix flipping * Add new flags * Fix PHEW empty clumps * Stop over-wrriting * Little improvements to angular neighbours * Add catalogue masking * Change if-else statements * Cache only filtered data * Add PHEW cats * Add comments * Sort imports * Get Quijote workign * Docs * Add HMF calculation * Move to old * Fix angular * Add great circle distance * Update imports * Update impotrts * Update docs * Remove unused import * Fix a quick bug * Update compatibility * Rename files * Renaming * Improve compatiblity * Rename snapsht * Fix snapshot bug * Update interface * Finish updating interface * Update all paths * Add old scripts * Add basic halo * Update imports * Improve snapshot processing * Update ordering * Fix how CM positions accessed * Add merger paths * Add imports * Add merger reading * Add making a merger tree * Add a basic merger tree reader * Add imports * Add main branch walking + comments + debuggin * Get tree running * Add working merger tree walking along main branch * Add units conversion for merger data * Add hid_to_array_index * Update merger tree * Add mergertree mass to PHEWcat * Edit comments * Add this to track changes... * Fix a little bug * Add mergertree mass * Add cache clearing * Improve summing substructure code * Littbe bug * Little updates to the merger tree reader * Update .giignore * Add box selection * Add optional deletingf of a group * add to keep track of changes * Update changes * Remove * Add manual tracker * Fix bug * Add m200c_to_r200c * Add manual halo tracking * Remove skipped snapshots * update cosmo params to match csiborg * remove old comments * Add SDSSxALFALFA * Fix bugs * Rename * Edit paths * Updates * Add comments * Add comment * Add hour conversion * Add imports * Add new observation class * Add selection * Add imports * Fix small bug * Add field copying for safety * Add matching to survey without masking * Add P(k) calculation * Add nb * Edit comment * Move files * Remove merger import * Edit setup.yp * Fix typo * Edit import warnigns * update nb * Update README * Update README * Update README * Add skeleton * Add skeleton
87 lines
3.4 KiB
Python
87 lines
3.4 KiB
Python
# This program is free software; you can redistribute it and/or modify it
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# under the terms of the GNU General Public License as published by the
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# Free Software Foundation; either version 3 of the License, or (at your
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# option) any later version.
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#
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# This program is distributed in the hope that it will be useful, but
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# WITHOUT ANY WARRANTY; without even the implied warranty of
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# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
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# Public License for more details.
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#
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# You should have received a copy of the GNU General Public License along
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# with this program; if not, write to the Free Software Foundation, Inc.,
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# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
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"""A script to match all IC pairs of a simulation."""
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import warnings
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from argparse import ArgumentParser
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from distutils.util import strtobool
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from itertools import combinations
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from random import Random
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from mpi4py import MPI
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from taskmaster import work_delegation
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import csiborgtools
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from match_singlematch import pair_match, pair_match_max
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def get_combs(simname):
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"""
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Get the list of all pairs of IC indices and permute them with a fixed
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seed.
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"""
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paths = csiborgtools.read.Paths(**csiborgtools.paths_glamdring)
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combs = list(combinations(paths.get_ics(simname), 2))
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Random(42).shuffle(combs)
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return combs
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def main(comb, kind, simname, min_logmass, sigma, mult, verbose):
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"""
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Match a pair of simulations.
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"""
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nsim0, nsimx = comb
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if kind == "overlap":
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pair_match(nsim0, nsimx, simname, min_logmass, sigma, verbose)
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elif args.kind == "max":
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pair_match_max(nsim0, nsimx, simname, min_logmass, mult, verbose)
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else:
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raise ValueError(f"Unknown matching kind: `{kind}`.")
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if __name__ == "__main__":
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parser = ArgumentParser()
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parser.add_argument("--kind", type=str, required=True,
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choices=["overlap", "max"], help="Kind of matching.")
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parser.add_argument("--simname", type=str, required=True,
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help="Simulation name.",
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choices=["csiborg", "quijote"])
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parser.add_argument("--nsim0", type=int, default=None,
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help="Reference IC for Max's matching method.")
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parser.add_argument("--min_logmass", type=float, required=True,
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help="Minimum log halo mass.")
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parser.add_argument("--sigma", type=float, default=0,
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help="Smoothing scale in number of grid cells.")
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parser.add_argument("--mult", type=float, default=5,
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help="Search radius multiplier for Max's method.")
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parser.add_argument("--verbose", type=lambda x: bool(strtobool(x)),
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default=False, help="Verbosity flag.")
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args = parser.parse_args()
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if args.kind == "overlap":
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combs = get_combs(args.simname)
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else:
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paths = csiborgtools.read.Paths(**csiborgtools.paths_glamdring)
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combs = [(args.nsim0, nsimx) for nsimx in paths.get_ics(args.simname)
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if nsimx != args.nsim0]
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def _main(comb):
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with warnings.catch_warnings():
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warnings.filterwarnings("ignore",
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"invalid value encountered in cast",
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RuntimeWarning)
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main(comb, args.kind, args.simname, args.min_logmass, args.sigma,
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args.mult, args.verbose)
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work_delegation(_main, combs, MPI.COMM_WORLD)
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