# Copyright (C) 2022 Richard Stiskalek # This program is free software; you can redistribute it and/or modify it # under the terms of the GNU General Public License as published by the # Free Software Foundation; either version 3 of the License, or (at your # option) any later version. # # This program is distributed in the hope that it will be useful, but # WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General # Public License for more details. # # You should have received a copy of the GNU General Public License along # with this program; if not, write to the Free Software Foundation, Inc., # 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA. """ Notebook utility functions. """ import numpy from os.path import join from astropy.cosmology import FlatLambdaCDM try: import csiborgtools except ModuleNotFoundError: import sys sys.path.append("../") Nsplits = 200 dumpdir = "/mnt/extraspace/rstiskalek/csiborg/" # Some chosen clusters _coma = {"RA": (12 + 59/60 + 48.7 / 60**2) * 15, "DEC": 27 + 58 / 60 + 50 / 60**2, "COMDIST": 102.975} _virgo = {"RA": (12 + 27 / 60) * 15, "DEC": 12 + 43/60, "COMDIST": 16.5} specific_clusters = {"Coma": _coma, "Virgo": _virgo} def load_processed(Nsim, Nsnap): simpath = csiborgtools.io.get_sim_path(Nsim) outfname = join( dumpdir, "ramses_out_{}_{}.npy".format(str(Nsim).zfill(5), str(Nsnap).zfill(5))) data = numpy.load(outfname) # Add mmain mmain = csiborgtools.io.read_mmain(Nsim, "/mnt/zfsusers/hdesmond/Mmain") data = csiborgtools.io.merge_mmain_to_clumps(data, mmain) csiborgtools.utils.flip_cols(data, "peak_x", "peak_z") # Cut on numbre of particles and finite m200 data = data[(data["npart"] > 100) & numpy.isfinite(data["m200"])] # Do unit conversion boxunits = csiborgtools.units.BoxUnits(Nsnap, simpath) convert_cols = ["m200", "m500", "totpartmass", "mass_mmain", "r200", "r500", "Rs", "rho0", "peak_x", "peak_y", "peak_z"] data = csiborgtools.units.convert_from_boxunits( data, convert_cols, boxunits) # Now calculate spherical coordinates d, ra, dec = csiborgtools.units.cartesian_to_radec(data) data = csiborgtools.utils.add_columns( data, [d, ra, dec], ["dist", "ra", "dec"]) return data, boxunits def load_planck2015(max_comdist=214): cosmo = FlatLambdaCDM(H0=70.5, Om0=0.307, Tcmb0=2.728) fpath = "../data/HFI_PCCS_SZ-union_R2.08.fits" return csiborgtools.io.read_planck2015(fpath, cosmo, max_comdist) def load_mcxc(max_comdist=214): cosmo = FlatLambdaCDM(H0=70.5, Om0=0.307, Tcmb0=2.728) fpath = ("../data/mcxc.fits") return csiborgtools.io.read_mcxc(fpath, cosmo, max_comdist) def load_2mpp(): cosmo = FlatLambdaCDM(H0=70.5, Om0=0.307, Tcmb0=2.728) return csiborgtools.io.read_2mpp("../data/2M++_galaxy_catalog.dat", cosmo) def load_2mpp_groups(): cosmo = FlatLambdaCDM(H0=70.5, Om0=0.307, Tcmb0=2.728) return csiborgtools.io.read_2mpp_groups( "../data/../data/2M++_group_catalog.dat", cosmo)