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Update script

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rstiskalek 2024-09-19 00:50:29 +01:00
parent 3464c6eb6d
commit c70d0479c6
1 changed files with 38 additions and 15 deletions
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53
scripts_independent/field_sph_gadget.sh
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@ -1,5 +1,5 @@
#!/bin/bash
nthreads=28
nthreads=12
memory=7
on_login=${1}
queue="berg"
@ -11,9 +11,10 @@ resolution=1024
SPH_executable="/mnt/users/rstiskalek/cosmotool/bld/sample/simple3DFilter"
scratch_space="/mnt/extraspace/rstiskalek/dump/"
snapshot_kind="gadget2"
snapshot_path="/mnt/extraspace/rstiskalek/CLONES/s8/cf2gvpecc1pt5elmo73_sig6distribsbvoldi_RZA3Derrv2_512_500_ss8_zinit60_000"
output_path="/mnt/extraspace/rstiskalek/CLONES/s8/cf2gvpecc1pt5elmo73_sig6distribsbvoldi_RZA3Derrv2_512_500_ss8_zinit60_000.hdf5"
# CLONES settings
# snapshot_kind="gadget2"
# snapshot_path="/mnt/extraspace/rstiskalek/CLONES/s8/cf2gvpecc1pt5elmo73_sig6distribsbvoldi_RZA3Derrv2_512_500_ss8_zinit60_000"
# output_path="/mnt/extraspace/rstiskalek/CLONES/s8/cf2gvpecc1pt5elmo73_sig6distribsbvoldi_RZA3Derrv2_512_500_ss8_zinit60_000.hdf5"
# Check if `on_login` is either 0 or 1
@ -26,14 +27,36 @@ fi
export OMP_NUM_THREADS={nthreads}
export OMP_NESTED=true
pythoncm="$env $file --snapshot_path $snapshot_path --output_path $output_path --resolution $resolution --scratch_space $scratch_space --SPH_executable $SPH_executable --snapshot_kind $snapshot_kind"
if [ $on_login -eq 1 ]; then
echo $pythoncm
$pythoncm
else
cm="addqueue -s -q $queue -n 1x$nthreads -m $memory $pythoncm"
echo "Submitting:"
echo $cm
echo
eval $cm
fi
# pythoncm="$env $file --snapshot_path $snapshot_path --output_path $output_path --resolution $resolution --scratch_space $scratch_space --SPH_executable $SPH_executable --snapshot_kind $snapshot_kind"
# if [ $on_login -eq 1 ]; then
# echo $pythoncm
# $pythoncm
# else
# cm="addqueue -s -q $queue -n 1x$nthreads -m $memory $pythoncm"
# echo "Submitting:"
# echo $cm
# echo
# eval $cm
# fi
# Manticore SWIFT submission loop
snapshot_kind="swift"
for k in {0..40}; do
snapshot_path="/mnt/extraspace/rstiskalek/MANTICORE/2MPP_N128_DES_V1/resimulations/R512/mcmc_$k/swift_monofonic/snap_0001/snap_0001.hdf5"
output_path="/mnt/extraspace/rstiskalek/MANTICORE/2MPP_N128_DES_V1/fields/R512/SPH_$k.hdf5"
pythoncm="$env $file --snapshot_path $snapshot_path --output_path $output_path --resolution $resolution --scratch_space $scratch_space --SPH_executable $SPH_executable --snapshot_kind $snapshot_kind"
if [ $on_login -eq 1 ]; then
echo $pythoncm
$pythoncm
else
cm="addqueue -s -q $queue -n 1x$nthreads -m $memory $pythoncm"
echo "Submitting:"
echo $cm
echo
eval $cm
fi
sleep 0.05
done