Mass enclosed in a sphere calculation (#5)

* rename nb

* add merge func

* rm bug..

* add static methods

* save rmin, rmax

* add properties for box units

* move radial info to the clump

* add Npart explicit

* move where rmin, rmax obtained

* add box cosmo

* add __getattr__

* add comments in units

* add enclosed spherical mass

* rm unused variables

* add clump mass setter

* add the halo index

* add enclosed overdensity

* add enclosed_overdensity

* simplify loss func

* opt result to nan

* change Rs to log10

* change back to attribs

* add H0 and h props

* add setattrs

* Remove global constants

* move Msuncgs above

* add crit density

* add dots

* add r200c and r500c

* add M200 and M500

* make lowercase

* output r200, r500, m200, m500

* update TODO

* update README

* fit NFW only up to r200

* add r178, m178

* add m178, r178

* update TODO

README.md

@@ -1,11 +1,16 @@
-# CSiBORG analysis tools :dart:
+# CSiBORG tools
 
-## TODO :scroll:
-- [ ] Calculate $M_{\rm vir}, R_{\rm vir}, c$ from $R_s, \rho_0, \ldots$
-- [ ] Calculate $M_{\rm 500c}$ by sphere shrinking
-- [ ] Calculate the cross-correlation in CSiBORG. Should see the scale of the constraints?
+## :scroll: Short-term TODO
+- [x] Calculate $M_{\rm vir}, R_{\rm vir}, c$ from $R_s, \rho_0, \ldots$
+- [x] In `NFWPosterior` correct for the radius in which particles are fitted.
+- [x] Calculate $M_{\rm 500c}$ by sphere shrinking
+- [x] Change to log10 of the scale factor
+- [ ] Calculate uncertainty on $R_{\rm s}$, switch to `JAX` and get gradients.
+
+
+## :hourglass: Long-term TODO
 - [ ] Improve file naming system
+- [ ] Calculate the cross-correlation in CSiBORG. Should see the scale of the constraints?
 
 
-## Open questions :bulb:
-- Get uncertainty on the fitted $R_{\rm s}$? If so get this directly from JAX.
+## :bulb: Open questions