mirror of
https://github.com/Richard-Sti/csiborgtools.git
synced 2024-12-22 17:28:02 +00:00
more renaming
This commit is contained in:
rstiskalek
parent
a9e98f5a2d
commit
a47847cb7c
4 changed files with 381 additions and 1937 deletions
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352
scripts/test_paths.ipynb
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352
scripts/test_paths.ipynb
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{
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"cells": [
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{
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"cell_type": "code",
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"execution_count": 2,
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"id": "5a38ed25",
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"metadata": {
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||||||
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"ExecuteTime": {
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"end_time": "2022-10-20T21:53:10.387523Z",
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"start_time": "2022-10-20T21:53:08.558627Z"
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}
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},
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"outputs": [],
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"source": [
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"import numpy as np\n",
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"try:\n",
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" import csiborgtools\n",
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"except ModuleNotFoundError:\n",
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" import sys\n",
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" sys.path.append(\"../\")\n",
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" import csiborgtools\n",
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" \n",
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" \n",
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"%load_ext autoreload\n",
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"%autoreload 2"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 23,
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"id": "7accd798",
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"metadata": {
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"ExecuteTime": {
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"end_time": "2022-10-20T22:00:25.350404Z",
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"start_time": "2022-10-20T22:00:24.775748Z"
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}
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},
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"outputs": [],
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"source": [
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"simpath = csiborgtools.io.get_sim_path(9844)\n",
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"Nsnap = 1016\n",
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"# csiborgtools.io.read_info(1016, simpath)"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 59,
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"id": "131c3107",
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"metadata": {
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"ExecuteTime": {
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"end_time": "2022-10-20T22:25:59.104572Z",
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"start_time": "2022-10-20T22:25:59.074460Z"
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}
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},
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"outputs": [],
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"source": [
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"box = csiborgtools.units.BoxUnits(Nsnap, simpath)"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 61,
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"id": "b1a11aa6",
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"metadata": {
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"ExecuteTime": {
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"end_time": "2022-10-20T22:26:12.931468Z",
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"start_time": "2022-10-20T22:26:12.671686Z"
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}
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},
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"outputs": [
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{
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"data": {
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"text/plain": [
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"3.765003070876428e+19"
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]
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},
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"execution_count": 61,
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"metadata": {},
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"output_type": "execute_result"
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}
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],
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"source": [
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"box.box2solarmass(1)"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 55,
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"id": "19f39a80",
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"metadata": {
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"ExecuteTime": {
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"end_time": "2022-10-20T22:24:59.563137Z",
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"start_time": "2022-10-20T22:24:59.530173Z"
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}
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},
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"outputs": [
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{
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"data": {
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"text/plain": [
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"3.749e+19"
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]
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},
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"execution_count": 55,
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"metadata": {},
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"output_type": "execute_result"
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}
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],
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"source": [
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"3.749e19"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 57,
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"id": "5d1413fd",
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"metadata": {
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"ExecuteTime": {
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"end_time": "2022-10-20T22:25:17.251057Z",
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"start_time": "2022-10-20T22:25:17.223543Z"
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}
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},
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"outputs": [
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{
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"data": {
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"text/plain": [
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"0.9957495198343349"
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]
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},
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"execution_count": 57,
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"metadata": {},
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"output_type": "execute_result"
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}
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],
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"source": [
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"box.solarmass2box(3.749e19)"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "90cf9d61",
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"metadata": {},
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"outputs": [],
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"source": []
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "b53e8166",
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"metadata": {},
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"outputs": [],
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"source": []
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "b3eeca5b",
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"metadata": {},
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"outputs": [],
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"source": []
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},
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{
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"cell_type": "code",
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"execution_count": 49,
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"id": "93d32800",
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"metadata": {
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"ExecuteTime": {
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"end_time": "2022-10-20T22:09:12.915516Z",
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"start_time": "2022-10-20T22:09:12.856213Z"
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}
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},
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"outputs": [
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{
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"data": {
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"text/plain": [
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"0.9988759675724455"
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]
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},
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"execution_count": 49,
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"metadata": {},
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"output_type": "execute_result"
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}
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],
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"source": [
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"box.kpc2box(677.7 / 0.705 * 1000)"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 43,
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"id": "66d3e98f",
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"metadata": {
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"ExecuteTime": {
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"end_time": "2022-10-20T22:06:46.471218Z",
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"start_time": "2022-10-20T22:06:46.437023Z"
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}
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},
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"outputs": [
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{
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"data": {
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"text/plain": [
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"678.4626139789958"
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]
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},
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"execution_count": 43,
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"metadata": {},
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"output_type": "execute_result"
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}
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],
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"source": [
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"box.box2kpc(1) / 1000 * 0.705"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "ef00a04c",
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"metadata": {},
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"outputs": [],
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"source": []
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "d201838b",
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"metadata": {},
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"outputs": [],
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"source": [
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"filename = \"/mnt/extraspace/hdesmond/ramses_out_9844/output_01016/info_01016.txt\""
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "d012a21b",
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"metadata": {},
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"outputs": [],
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"source": []
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "547f7944",
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"metadata": {
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"ExecuteTime": {
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||||||
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"end_time": "2022-10-20T19:52:22.548299Z",
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"start_time": "2022-10-20T19:52:22.544342Z"
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}
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},
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"outputs": [],
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"source": [
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"results_filepath = '/mnt/extraspace/deaglan/H-AGN/'\n",
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"sugata_filepath = '/mnt/extraspace/jeg/greenwhale/Sugata/'\n",
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"\n",
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"def info_dir():\n",
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" return sugata_filepath + 'INFO/'\n",
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"\n",
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"def info_file(nout):\n",
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" return info_dir() + 'info_' + str(nout).zfill(5) + '.txt'\n",
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"\n",
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"def h_agn_particle_directory(nout):\n",
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" return sugata_filepath + 'H-AGN/output_' + str(nout).zfill(5) + '/'\n",
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"\n",
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"def cosmo_dir():\n",
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" return './data/'\n",
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"\n",
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"def cosmo_file(nout):\n",
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" return cosmo_dir() + 'cosmo_table_' + str(nout).zfill(5) + '.txt'"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "30630635",
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"metadata": {
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"ExecuteTime": {
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"end_time": "2022-10-20T19:52:22.777853Z",
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"start_time": "2022-10-20T19:52:22.774584Z"
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}
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},
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"outputs": [],
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"source": [
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"info_dir()"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "a3fc21b2",
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"metadata": {
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"ExecuteTime": {
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"end_time": "2022-10-20T19:56:35.946185Z",
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"start_time": "2022-10-20T19:56:35.943643Z"
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}
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},
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"outputs": [],
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"source": [
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"filename = \"/mnt/extraspace/hdesmond/ramses_out_9844/output_01016/info_01016.txt\""
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "fae40a32",
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"metadata": {
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"ExecuteTime": {
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"end_time": "2022-10-20T20:05:04.410987Z",
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"start_time": "2022-10-20T20:05:04.403721Z"
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},
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"scrolled": false
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},
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"outputs": [],
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"source": [
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"e"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "de7e3ae7",
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"metadata": {},
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"outputs": [],
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"source": []
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}
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],
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"metadata": {
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"kernelspec": {
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"display_name": "Python 3.8.0 ('venv_galomatch': virtualenv)",
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"language": "python",
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"name": "python3"
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},
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"language_info": {
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"codemirror_mode": {
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"name": "ipython",
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"version": 3
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},
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"file_extension": ".py",
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"mimetype": "text/x-python",
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"name": "python",
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"nbconvert_exporter": "python",
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"pygments_lexer": "ipython3",
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"version": "3.8.0"
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},
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"vscode": {
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"interpreter": {
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"hash": "f29d02a8350410abc2a9fb79641689d10bf7ab64afc03ec87ca3cf6ed2daa499"
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}
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}
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},
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"nbformat": 4,
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"nbformat_minor": 5
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}
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@ -22,7 +22,7 @@ from tqdm import trange
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from astropy.cosmology import FlatLambdaCDM
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from astropy.cosmology import FlatLambdaCDM
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try:
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try:
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import galomatch
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import csiborgtools
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except ModuleNotFoundError:
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except ModuleNotFoundError:
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import sys
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import sys
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sys.path.append("../")
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sys.path.append("../")
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@ -30,19 +30,21 @@ except ModuleNotFoundError:
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def load_mmain_convert(n):
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def load_mmain_convert(n):
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srcdir = "/users/hdesmond/Mmain"
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srcdir = "/users/hdesmond/Mmain"
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arr = galomatch.io.read_mmain(n, srcdir)
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arr = csiborgtools.io.read_mmain(n, srcdir)
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galomatch.utils.convert_mass_cols(arr, "mass_cl")
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csiborgtools.utils.convert_mass_cols(arr, "mass_cl")
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galomatch.utils.convert_position_cols(arr, ["peak_x", "peak_y", "peak_z"])
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csiborgtools.utils.convert_position_cols(
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galomatch.utils.flip_cols(arr, "peak_x", "peak_z")
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arr, ["peak_x", "peak_y", "peak_z"])
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csiborgtools.utils.flip_cols(arr, "peak_x", "peak_z")
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d, ra, dec = galomatch.utils.cartesian_to_radec(arr)
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d, ra, dec = csiborgtools.utils.cartesian_to_radec(arr)
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arr = galomatch.utils.add_columns(arr, [d, ra, dec], ["dist", "ra", "dec"])
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arr = csiborgtools.utils.add_columns(
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arr, [d, ra, dec], ["dist", "ra", "dec"])
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return arr
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return arr
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def load_mmains(N=None, verbose=True):
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def load_mmains(N=None, verbose=True):
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ids = galomatch.io.get_csiborg_ids("/mnt/extraspace/hdesmond")
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ids = csiborgtools.io.get_csiborg_ids("/mnt/extraspace/hdesmond")
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N = ids.size if N is None else N
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N = ids.size if N is None else N
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if N > ids.size:
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if N > ids.size:
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raise ValueError("`N` cannot be larger than 101.")
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raise ValueError("`N` cannot be larger than 101.")
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@ -62,11 +64,11 @@ def load_mmains(N=None, verbose=True):
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||||||
|
|
||||||
def load_planck2015(max_comdist=214):
|
def load_planck2015(max_comdist=214):
|
||||||
cosmo = FlatLambdaCDM(H0=70.5, Om0=0.307, Tcmb0=2.728)
|
cosmo = FlatLambdaCDM(H0=70.5, Om0=0.307, Tcmb0=2.728)
|
||||||
fpath = ("/mnt/zfsusers/rstiskalek/galomatch/"
|
fpath = ("/mnt/zfsusers/rstiskalek/csiborgtools/"
|
||||||
+ "data/HFI_PCCS_SZ-union_R2.08.fits")
|
+ "data/HFI_PCCS_SZ-union_R2.08.fits")
|
||||||
return galomatch.io.read_planck2015(fpath, cosmo, max_comdist)
|
return csiborgtools.io.read_planck2015(fpath, cosmo, max_comdist)
|
||||||
|
|
||||||
|
|
||||||
def load_2mpp():
|
def load_2mpp():
|
||||||
cosmo = FlatLambdaCDM(H0=70.5, Om0=0.307, Tcmb0=2.728)
|
cosmo = FlatLambdaCDM(H0=70.5, Om0=0.307, Tcmb0=2.728)
|
||||||
return galomatch.io.read_2mpp("../data/2M++_galaxy_catalog.dat", cosmo)
|
return csiborgtools.io.read_2mpp("../data/2M++_galaxy_catalog.dat", cosmo)
|
||||||
|
|
|
||||||
Loading…
Reference in a new issue