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Add Quijote SPH

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rstiskalek 2024-10-05 00:54:10 +01:00
parent fe45d62733
commit 34f997cd33
1 changed files with 32 additions and 9 deletions
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41
scripts_independent/field_sph_gadget.sh
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@ -2,12 +2,12 @@
nthreads=12 nthreads=12
memory=7 memory=7
on_login=${1} on_login=${1}
queue="berg" queue="cmb"
env="/mnt/zfsusers/rstiskalek/csiborgtools/venv_csiborg/bin/python" env="/mnt/zfsusers/rstiskalek/csiborgtools/venv_csiborg/bin/python"
file="field_sph_gadget.py" file="field_sph_gadget.py"
# Guilhem says higher resolution is better # Guilhem says higher resolution is better
resolution=1024 resolution=256
SPH_executable="/mnt/users/rstiskalek/cosmotool/bld/sample/simple3DFilter" SPH_executable="/mnt/users/rstiskalek/cosmotool/bld/sample/simple3DFilter"
scratch_space="/mnt/extraspace/rstiskalek/dump/" scratch_space="/mnt/extraspace/rstiskalek/dump/"
@ -24,8 +24,8 @@ if [ -z "$on_login" ] || ! [[ "$on_login" =~ ^[0-1]$ ]]; then
exit 1 exit 1
fi fi
export OMP_NUM_THREADS={nthreads} export OMP_NUM_THREADS=$nthreads
export OMP_NESTED=true export OMP_MAX_ACTIVE_LEVELS=4
# pythoncm="$env $file --snapshot_path $snapshot_path --output_path $output_path --resolution $resolution --scratch_space $scratch_space --SPH_executable $SPH_executable --snapshot_kind $snapshot_kind" # pythoncm="$env $file --snapshot_path $snapshot_path --output_path $output_path --resolution $resolution --scratch_space $scratch_space --SPH_executable $SPH_executable --snapshot_kind $snapshot_kind"
# if [ $on_login -eq 1 ]; then # if [ $on_login -eq 1 ]; then
@ -40,11 +40,34 @@ export OMP_NESTED=true
# fi # fi
# Manticore SWIFT submission loop # ####### Manticore SWIFT submission loop #######
snapshot_kind="swift" # snapshot_kind="swift"
for k in {0..40}; do # for k in {0..40}; do
snapshot_path="/mnt/extraspace/rstiskalek/MANTICORE/2MPP_N128_DES_V1/resimulations/R512/mcmc_$k/swift_monofonic/snap_0001/snap_0001.hdf5" # snapshot_path="/mnt/extraspace/rstiskalek/MANTICORE/2MPP_N128_DES_V1/resimulations/R512/mcmc_$k/swift_monofonic/snap_0001/snap_0001.hdf5"
output_path="/mnt/extraspace/rstiskalek/MANTICORE/2MPP_N128_DES_V1/fields/R512/SPH_$k.hdf5" # output_path="/mnt/extraspace/rstiskalek/MANTICORE/2MPP_N128_DES_V1/fields/R512/SPH_$k.hdf5"
#
# pythoncm="$env $file --snapshot_path $snapshot_path --output_path $output_path --resolution $resolution --scratch_space $scratch_space --SPH_executable $SPH_executable --snapshot_kind $snapshot_kind"
# if [ $on_login -eq 1 ]; then
# echo $pythoncm
# $pythoncm
# else
# cm="addqueue -s -q $queue -n 1x$nthreads -m $memory $pythoncm"
# echo "Submitting:"
# echo $cm
# echo
# eval $cm
# fi
#
# sleep 0.05
# done
####### Quijote submission loop #######
snapshot_kind="gadget2"
for k in {1..50}; do
# for k in 0; do
snapshot_path="/mnt/extraspace/rstiskalek/quijote/Snapshots_fiducial/${k}/snapdir_004/snap_004"
output_path="/mnt/extraspace/rstiskalek/quijote/SPHField_fiducial/field_${k}_004.hdf5"
pythoncm="$env $file --snapshot_path $snapshot_path --output_path $output_path --resolution $resolution --scratch_space $scratch_space --SPH_executable $SPH_executable --snapshot_kind $snapshot_kind" pythoncm="$env $file --snapshot_path $snapshot_path --output_path $output_path --resolution $resolution --scratch_space $scratch_space --SPH_executable $SPH_executable --snapshot_kind $snapshot_kind"
if [ $on_login -eq 1 ]; then if [ $on_login -eq 1 ]; then