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Quijote kNN adding (#62)

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* Fix small bug

* Add fiducial observers

* Rename 1D knn

* Add new bounds system

* rm whitespace

* Add boudns

* Add simname to paths

* Add fiducial obserevrs

* apply bounds only if not none

* Add TODO

* add simnames

* update script

* Fix distance bug

* update yaml

* Update file reading

* Update gitignore

* Add plots

* add check if empty list

* add func to obtaining cross

* Update nb

* Remove blank lines

* update ignroes

* loop over a few ics

* update gitignore

* add comments
This commit is contained in:
Richard Stiskalek 2023-05-15 23:30:10 +01:00 • committed by GitHub
parent 7971fe2bc1
commit 255bec9710
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16 changed files with 635 additions and 231 deletions
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11
scripts/match_singlematch.py
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@ -39,12 +39,11 @@ def pair_match(nsim0, nsimx, sigma, smoothen, verbose):
# Load the raw catalogues (i.e. no selection) including the initial CM
# positions and the particle archives.
cat0 = HaloCatalogue(nsim0, paths, load_initial=True,
minmass=("totpartmass", 1e12), with_lagpatch=True,
load_clumps_cat=True)
catx = HaloCatalogue(nsimx, paths, load_initial=True,
minmass=("totpartmass", 1e12), with_lagpatch=True,
load_clumps_cat=True)
bounds = {"totpartmass": (1e12, None)}
cat0 = HaloCatalogue(nsim0, paths, load_initial=True, bounds=bounds,
with_lagpatch=True, load_clumps_cat=True)
catx = HaloCatalogue(nsimx, paths, load_initial=True, bounds=bounds,
with_lagpatch=True, load_clumps_cat=True)
clumpmap0 = read_h5(paths.particles_path(nsim0))["clumpmap"]
parts0 = read_h5(paths.initmatch_path(nsim0, "particles"))["particles"]