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Add Quijote (#61)

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* Rename paths object

* Remove redshift calculation

* Explicit keywrod arg

* Rename box units

* Basic renaming

* Little docs

* Rename paths

* add imports

* Sort imports

* Add Quijote cat

* Split boxes

* add Quijote path

* Add origin argument

* Update nbs
This commit is contained in:
Richard Stiskalek 2023-05-13 17:37:34 +01:00 • committed by GitHub
parent b3fd14b81f
commit 1d847cbd06
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34 changed files with 1401 additions and 292 deletions
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scripts/fit_profiles.py
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@ -45,7 +45,7 @@ nproc = comm.Get_size()
if nproc > 1:
raise NotImplementedError("MPI is not implemented implemented yet.")
paths = csiborgtools.read.CSiBORGPaths(**csiborgtools.paths_glamdring)
paths = csiborgtools.read.Paths(**csiborgtools.paths_glamdring)
cols_collect = [("r", numpy.float32), ("M", numpy.float32)]
if args.ics is None or args.ics == -1:
nsims = paths.get_ics()
@ -59,7 +59,7 @@ for i, nsim in enumerate(nsims):
now = datetime.now()
print(f"{now}: calculating {i}th simulation `{nsim}`.", flush=True)
nsnap = max(paths.get_snapshots(nsim))
box = csiborgtools.read.BoxUnits(nsnap, nsim, paths)
box = csiborgtools.read.CSiBORGBox(nsnap, nsim, paths)
f = csiborgtools.read.read_h5(paths.particles_path(nsim))
particles = f["particles"]