mirror of
https://github.com/Richard-Sti/csiborgtools.git
synced 2024-12-23 02:28:02 +00:00
41 lines
1.2 KiB
Bash
41 lines
1.2 KiB
Bash
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#!/bin/sh
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#SBATCH --ntasks-per-node=1
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#SBATCH --nodes=1
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#SBATCH --cpus-per-task=16
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#SBATCH --mem-per-cpu=7000
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#SBATCH -J SPH
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#SBATCH -o output_%J.out
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#SBATCH -e error_%J.err
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#SBATCH -p cosma8-serial
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#SBATCH -A dp016
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#SBATCH -t 04:00:00
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#SBATCH --mail-type=BEGIN,END,FAIL
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#SBATCH --mail-user=richard.stiskalek@physics.ox.ac.uk
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module purge
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module load intel_comp/2019
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module load intel_mpi/2019
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module load hdf5
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module load fftw
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module load gsl
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module load cmake
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module load python/3.10.12
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module list
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source /cosma/home/dp016/dc-stis1/csiborgtools/venv_csiborgtools/bin/activate
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export OMP_NUM_THREADS=16
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export OMP_NESTED=true
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# ADD CHAINS HERE
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snapshot_path="/cosma8/data/dp016/dc-stis1/csiborg2_main/chain_15517/output/snapshot_099_full.hdf5"
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output_path="/cosma8/data/dp016/dc-stis1/csiborg2_main/field/chain_15517.hdf5"
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resolution=256
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scratch_space="/cosma8/data/dp016/dc-stis1/csiborg2_main/field"
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SPH_executable="/cosma8/data/dp016/dc-stis1/cosmotool/bld2/sample/simple3DFilter"
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snapshot_kind="gadget4"
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python3 field_sph.py --snapshot_path $snapshot_path --output_path $output_path --resolution $resolution --scratch_space $scratch_space --SPH_executable $SPH_executable --snapshot_kind $snapshot_kind
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